DSAP is a web server designed to provide a total solution to analyze small RNAs sequencing data generated by SOLEXA. The functions of DSAP suite include adaptor removal, clustering of tags, classification of non-coding small RNAs and miRNAs basis on sequencing homology search against the Rfam and miRBase databases respectively. DSAP also provide comparative miRNA expression profile analysis for up to 5 datasets. These functions all together can provide a global and comprehensive view on the expression profiles of miRNAs with sequence homology to known miRNAs in any organisms even without an available reference genome. Furthermore, DSAP's processing rate is extremely fast, it takes only 15 minutes to finish a single job of two million sequence tags.
[Ref. DB Update] miRBase upgraded to version16.
[New Function] miRNAomics:Pairwise Comparison(scatter plot, fold-
change, normalized expression profile, p-value filter, ).
[Mirror site] DSAP @NTHU.
[New Function] Cross-species comparison can be displayed
by phylogenic distribution .
|2010/3||[New parameter] Don't consider polyATCGN.
[New Function] Add a summary section to the output page.
[Bugs Fixed] Fixed the bug that outputs wrong in cross-experiments comparison.
|2009/09||[Ref. DB Update] miRBase upgraded to version14 .|
|2009/08||[Update] DSAP upgraded to version1.0 .|
|2009/03||[Ref. DB Update] miRBase upgraded to version13 .|
|2009/01||[Ref. DB Update] Rfam upgraded to version9.1 .|
|2008/12||[Ref. DB Update] miRBase upgraded to version12 .|
|2008/10||DSAP beta1 version release.|